LeftOuterShuffleJoin
Timers
LeftOuterShuffleRegionJoin
rdd
LoadAlignmentRecords
Timers
LoadFeatures
Timers
LoadFragments
Timers
label
Symbol
leftOuterShuffleRegionJoin
GenomicRDD
length
ReferenceRegion SequenceRecord ReadField SequenceField SliceField
library
RecordGroup RecordGroupMetadataField
loadAlignments
ADAMContext
loadBam
ADAMContext
loadBed
ADAMContext
loadCoverage
ADAMContext
loadFasta
ADAMContext
loadFastq
ADAMContext
loadFeatures
ADAMContext
loadFragments
ADAMContext
loadGenotypes
ADAMContext
loadGff3
ADAMContext
loadGtf
ADAMContext
loadIndexedBam
ADAMContext
loadIndexedVcf
ADAMContext
loadInterleavedFastq
ADAMContext
loadInterleavedFastqAsFragments
ADAMContext
loadIntervalList
ADAMContext
loadNarrowPeak
ADAMContext
loadPairedFastq
ADAMContext
loadParquet
ADAMContext
loadParquetAlignments
ADAMContext
loadParquetContigFragments
ADAMContext
loadParquetCoverage
ADAMContext
loadParquetFeatures
ADAMContext
loadParquetFragments
ADAMContext
loadParquetGenotypes
ADAMContext
loadParquetVariants
ADAMContext
loadReferenceFile
ADAMContext
loadSequences
ADAMContext
loadUnpairedFastq
ADAMContext
loadVariants
ADAMContext
loadVcf
ADAMContext
logProbabilityToPhred
PhredUtils